Entity Registration Schemas & Guidelines

From the Data Sharing Portal, users have the ability to register entities individually and in bulk.

More information regarding the structure of the SenNet provenance can be found here.

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Visit this page to learn more: Getting Started

Available bulk registration schemas

• Sources
• Samples
• Data Upload

Available Metadata and Directory Schemas

Uploading metadata in bulk can be done via the Data Sharing Portal.

Source

• Source - Murine

Sample

• Sample - Block
• Sample - Section
• Sample - Suspension

Read More: HuBMAP Schemas

For assistance with validating your metadata files please visit the CEDAR Metadata Spreadsheet Validator.

Registration Interfaces

Data Sharing Portal

Users can use the online graphical user interface to register entities. The process is as follows:

• Navigate to Data Sharing Portal and then click Login from the top right.
• Select the Register entity drop down menu link  
• Choose either to register a single entity or do bulk registration. The single form interface fields are well labeled. The question mark icons on the right of field labels provide tips on what the expected value should be   . Red asteriks ^* denote required fields. The bulk registration interface is presented in a form of a wizard. Use the associated example.tsv field on the respective form as a guide for filling out the data to be uploaded.

API

Users may also utilize the API to register entities. Each request to the API must be authorized. For a quick guide, see the APIs Getting Started page.